cord example
This commit is contained in:
57
cord/main.py
57
cord/main.py
@ -124,16 +124,16 @@ def on_save():
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@st.cache_resource
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@st.cache_resource
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def load_data(file):
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def load_data(file):
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# 读取数据文件
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# 读取数据文件
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if file is not None:
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try:
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try:
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if st.session_state.get("use_example", False):
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data = create_example()[0]
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else:
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data = pd.read_excel(file) if file.name.endswith((".xlsx", ".xls")) else pd.read_csv(file)
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data = pd.read_excel(file) if file.name.endswith((".xlsx", ".xls")) else pd.read_csv(file)
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if data.columns.tolist() != ["Name", "Energy"]:
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if data.columns.tolist() != ["Name", "Energy"]:
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st.warning("Format should be Name, Energy. Modified automatically.")
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st.warning("Format should be Name, Energy. Modified automatically.")
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data.columns = ["Name", "Energy"]
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data.columns = ["Name", "Energy"]
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except Exception as e:
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except Exception as e:
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st.error(f"Error reading file: {e}")
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st.error(f"Error reading file: {e}")
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exit()
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else:
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exit()
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exit()
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INFLU_FACTORS = [0.5] * data.shape[0] * 2 # 动态创建数组
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INFLU_FACTORS = [0.5] * data.shape[0] * 2 # 动态创建数组
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@ -147,34 +147,52 @@ def load_data(file):
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return data, INFLU_FACTORS,K_POS
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return data, INFLU_FACTORS,K_POS
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@st.cache_data
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def create_example():
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tmp_file = io.BytesIO()
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example = pd.DataFrame({"Name":["reactant","TS","result"], "Energy":[-400.310327,-400.210017,-400.341576,]})
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example.to_excel(tmp_file, index=False)
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return example,tmp_file
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out_file = io.BytesIO()
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out_file = io.BytesIO()
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st.set_page_config(
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st.set_page_config(
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page_title="反应坐标绘制",
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page_title="反应坐标绘制",
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page_icon=":chart_with_upwards_trend:",
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page_icon=":chart_with_upwards_trend:",
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initial_sidebar_state="expanded"
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initial_sidebar_state="expanded",layout="wide"
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)
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)
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st.title("反应坐标绘制")
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st.title("反应坐标绘制")
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st.write("---")
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st.write("---")
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file = st.file_uploader("上传能量文件", type=["xlsx", "xls", "csv"],key="file")
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file = st.file_uploader("上传能量文件", type=["xlsx", "xls", "csv"],key="file")
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if not file:
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st.set_page_config(layout="centered")
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if not file and not st.session_state.get("use_example", False) and "datas" not in st.session_state:
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# st.set_page_config(layout="centered")
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st.write("按照下列格式上传表格。请保证列名和范例一致,或直接下载。")
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st.write("按照下列格式上传表格。请保证列名和范例一致,或直接下载。")
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st.warning("注意,Energy单位为Hatree,程序将自动转换为kcal/mol的相对能量")
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st.warning("注意,Energy单位为Hatree,程序将自动转换为kcal/mol的相对能量")
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example = pd.DataFrame({"Name":["reactant","TS","result"], "Energy":[-400.310327,-400.210017,-400.341576,]})
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example,tmp_file = create_example()
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st.dataframe(example,hide_index=True)
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st.dataframe(example,hide_index=True)
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tmp_file = io.BytesIO()
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example.to_excel(tmp_file, index=False)
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st.download_button("下载模板",data=tmp_file,file_name="reaction_coordinate_example.xlsx")
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st.download_button("下载模板",data=tmp_file,file_name="reaction_coordinate_example.xlsx")
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def use_tmp():
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global file
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st.session_state["use_example"] = True
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file = tmp_file
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st.button("使用样例使用",on_click=use_tmp)
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st.stop()
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st.stop()
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else:
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else:
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st.set_page_config(layout="wide")
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pass
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# st.set_page_config(layout="wide")
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col1,col2 = st.columns([0.4,0.6],gap="medium")
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col1,col2 = st.columns([0.4,0.6],gap="medium")
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with col2:
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with col2:
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data, INFLU_FACTORS,K_POS = load_data(file)
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if "datas" not in st.session_state:
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data, INFLU_FACTORS,K_POS = load_data(file)
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st.session_state["datas"] = (data, INFLU_FACTORS,K_POS)
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else:
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data, INFLU_FACTORS, K_POS = st.session_state["datas"]
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fig,lines = plot_reaction_coordinate()
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fig,lines = plot_reaction_coordinate()
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stfig = st.pyplot(fig,False)
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stfig = st.pyplot(fig,False)
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@ -211,7 +229,6 @@ with col1:
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xmin,xmax = plt.xlim()
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xmin,xmax = plt.xlim()
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ymin,ymax = plt.ylim()
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ymin,ymax = plt.ylim()
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st.session_state["xylim"] = (xmin,xmax,ymin,ymax)
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st.session_state["xylim"] = (xmin,xmax,ymin,ymax)
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st.info(st.session_state["xylim"])
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xmin,xmax,ymin,ymax = st.session_state["xylim"]
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xmin,xmax,ymin,ymax = st.session_state["xylim"]
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dxmin,dxmax,dymin,dymax = abs(xmin)*0.5,abs(xmax)*0.5,abs(ymin)*0.5,abs(ymax)*0.5
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dxmin,dxmax,dymin,dymax = abs(xmin)*0.5,abs(xmax)*0.5,abs(ymin)*0.5,abs(ymax)*0.5
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@ -234,7 +251,9 @@ with col1:
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st.slider("字体大小",8,20, value=12, key="font_size",
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st.slider("字体大小",8,20, value=12, key="font_size",
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on_change=lambda: plt.rcParams.update({'font.size': st.session_state.get("font_size", 12)}))
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on_change=lambda: plt.rcParams.update({'font.size': st.session_state.get("font_size", 12)}))
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if st.button("重置",type="primary"):
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st.session_state.clear()
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st.rerun()
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st.write("---")
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st.write("---")
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st.dataframe(data)
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st.dataframe(data)
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